STRINGSTRING
Zm.17458 protein (Zea mays) - STRING interaction network
"Zm.17458" - E3 ubiquitin-protein ligase HOS1-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.17458E3 ubiquitin-protein ligase HOS1-like (925 aa)    
Predicted Functional Partners:
c3h29
Nucleic acid binding protein (401 aa)
       
      0.942
cl27985_1a
Hypothetical protein LOC100193144 (377 aa)
       
 
  0.816
Zm.5259
Putative HLH DNA-binding domain superfamily protein (518 aa)
       
 
  0.816
Zm.131062
Transcription factor SCREAM2-like (519 aa)
       
 
  0.733
hda110
Histone deacetylase (618 aa)
     
      0.667
rpd3
Probable histone deacetylase 19 (700 aa)
       
      0.653
hda108
Histone deacetylase (458 aa)
       
      0.653
Zm.94921
Histone deacetylase (432 aa)
       
      0.653
pco105988a
Constans (428 aa)
       
 
  0.621
rbap1
Nucleosome/chromatin assembly factor C (1391 aa)
     
 
  0.619
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (11%) [HD]