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100285090 protein (Zea mays) - STRING interaction network
"100285090" - E3 ubiquitin-protein ligase XBAT32 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100285090E3 ubiquitin-protein ligase XBAT32; Uncharacterized protein; XBAT32 (484 aa)    
Predicted Functional Partners:
100191485
Putative E3 ubiquitin-protein ligase XBAT35; Protein binding protein; Uncharacterized protein (517 aa)
     
   
  0.878
arftf20
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1147 aa)
           
  0.711
tdsgR34C09
annotation not available (612 aa)
       
 
  0.707
107521951
annotation not available (462 aa)
       
 
  0.660
GRMZM2G337905_P01
ATP-dependent DNA helicase; Belongs to the helicase family (1954 aa)
     
 
  0.650
100217177
Ribosome-recycling factor chloroplastic (266 aa)
       
 
  0.593
GRMZM2G307094_P01
Uncharacterized protein (153 aa)
       
 
  0.593
GRMZM2G159250_P01
Ribosome-recycling factor chloroplastic; Ribosome recycling factor; Uncharacterized protein (264 aa)
       
 
  0.593
GRMZM2G088348_P01
annotation not available (347 aa)
       
 
  0.590
GRMZM2G302080_P01
Uncharacterized protein (488 aa)
     
 
  0.562
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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