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STRINGSTRING
pgl1 protein (Zea mays) - STRING interaction network
"pgl1" - Exopolygalacturonase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgl1Exopolygalacturonase; May function in depolymerizing pectin during pollen development, germination, and tube growth. Acts as an exo- polygalacturonase (410 aa)    
Predicted Functional Partners:
Cel24A
Endoglucanase 11; Belongs to the glycosyl hydrolase 9 (cellulase E) family (526 aa)
           
  0.745
Cel9
annotation not available (521 aa)
           
  0.745
100216962
Pectinesterase (349 aa)
 
     
  0.610
GRMZM2G121278_P01
Pectinesterase (337 aa)
 
     
  0.512
cl55825_1b
Putative pectinesterase 67 (346 aa)
 
   
  0.504
GRMZM2G175499_P01
Pectinesterase (559 aa)
 
     
  0.498
107546770
annotation not available (562 aa)
 
   
  0.488
CPNA
Chaperonin CPN60-2, mitochondrial; Implicated in mitochondrial protein import and macromolecular assembly. May facilitate the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix (576 aa)
           
  0.483
phyS11
Phytase1; Phytase (387 aa)
           
  0.483
100284538
SHI (296 aa)
           
  0.482
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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