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gpm405 protein (Zea mays) - STRING interaction network
"gpm405" - ABC transporter I family member 6 chloroplastic in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm405ABC transporter I family member 6 chloroplastic; ATP-dependent transporter ycf16; Uncharacterized protein (321 aa)    
Predicted Functional Partners:
pco141591
UPF0051 protein ABCI8 chloroplastic (540 aa)
 
  0.999
103634793
Protein ABCI7 chloroplastic (481 aa)
 
 
  0.998
GRMZM2G111511_P01
ABC transporter I family member 10 chloroplastic (281 aa)
     
   
  0.832
gpm628
Translation initiation factor eIF-2B alpha subunit ; Belongs to the eIF-2B alpha/beta/delta subunits family (363 aa)
     
        0.831
GRMZM2G060470_P02
Cysteine desulfurase 1 chloroplastic (460 aa)
 
   
  0.830
GRMZM2G031954_P01
ABC transporter F family member 1 (639 aa)
         
  0.822
100501258
ABC transporter I family member 11 chloroplastic (273 aa)
     
   
  0.773
GRMZM2G081541_P01
ABC transporter F family member 1 (597 aa)
         
  0.735
gpm354
ABC transporter F family member 1 (595 aa)
         
  0.735
pco116062
Hydroxymethylbutenyl diphosphate synthase1 (746 aa)
   
   
  0.724
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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