STRINGSTRING
KOB1 protein (Zea mays) - STRING interaction network
"KOB1" - Hypothetical protein LOC100273097 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOB1Hypothetical protein LOC100273097 (521 aa)    
Predicted Functional Partners:
Zm.6197
Hypothetical protein LOC100191947 ; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH (250 aa)
           
  0.569
endo1
Hypothetical protein LOC100193093 (472 aa)
           
  0.529
cesa8
Cellulose synthase8 (1094 aa)
           
  0.525
Zm.521
Cellulose synthase6 (1089 aa)
           
  0.523
Zm.520
Cellulose synthase-4 (1077 aa)
           
  0.468
cesa7
Cellulose synthase7 (1086 aa)
           
  0.465
Zm.67746
Cellulose synthase-1 (1075 aa)
           
  0.465
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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