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STRINGSTRING
otp51 protein (Zea mays) - STRING interaction network
"otp51" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
otp51annotation not available (783 aa)    
Predicted Functional Partners:
103653700
Putative pentatricopeptide repeat family protein (882 aa)
           
  0.913
RNC1
Ribonuclease III domain-containing protein RNC1, chloroplastic; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis (525 aa)
     
   
  0.814
CAF1
CRS2-associated factor 1, chloroplastic; Required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (392 aa)
     
   
  0.758
103627663
annotation not available (473 aa)
           
  0.732
103627587
annotation not available (484 aa)
           
  0.685
mat-r
Maturase (653 aa)
           
  0.678
tha8
Tha8; Thylakoid assembly8 (263 aa)
     
   
  0.660
GRMZM2G020008_P01
Putative pentatricopeptide repeat-containing protein (594 aa)
           
  0.650
CAF2
CRS2-associated factor 2, chloroplastic; Required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (611 aa)
     
   
  0.644
GRMZM2G347322_P01
Uncharacterized protein (208 aa)
     
   
  0.626
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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