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mTRF28 protein (Zea mays) - STRING interaction network
"mTRF28" - Putative mitochondrial transcription termination factor family protein in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mTRF28Putative mitochondrial transcription termination factor family protein (420 aa)    
Predicted Functional Partners:
100191497
Protein NUCLEAR FUSION DEFECTIVE 5 mitochondrial (673 aa)
     
      0.893
103641217
Thyroid adenoma-associated protein-like protein (2194 aa)
     
        0.834
100283563
Mitochondrial glycoprotein (185 aa)
     
        0.833
IDP267
Elongator complex protein 1; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1334 aa)
     
        0.833
103633059
annotation not available (455 aa)
     
        0.827
100278278
Pentatricopeptide repeat-containing protein mitochondrial (500 aa)
     
      0.818
GRMZM6G832911_P01
annotation not available (152 aa)
     
      0.809
GRMZM2G450863_P01
Uncharacterized protein (1482 aa)
     
      0.671
GRMZM2G088348_P01
annotation not available (347 aa)
     
      0.671
tdsgR05E01
annotation not available (74 aa)
     
        0.600
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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