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STRINGSTRING
zim17 protein (Zea mays) - STRING interaction network
"zim17" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zim17annotation not available (1604 aa)    
Predicted Functional Partners:
100193455
Nuclear-pore anchor (1994 aa)
     
 
  0.977
GRMZM2G461356_P01
annotation not available (909 aa)
     
 
  0.972
AC207546.3_FGP004
annotation not available (510 aa)
     
 
  0.933
tdsgR34C09
annotation not available (612 aa)
     
 
  0.923
100193209
Enhanced ethylene response protein 5 (409 aa)
     
 
  0.902
TIDP3731
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (112 aa)
       
 
  0.827
GRMZM2G044265_P01
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (111 aa)
       
 
  0.827
GRMZM2G348675_P02
Nuclear pore complex protein NUP107 (1102 aa)
     
 
  0.821
100280804
Deleted in split hand/splt foot protein 1; Uncharacterized protein (75 aa)
       
 
  0.816
cl7399_1a
Deleted in split hand/splt foot protein 1; Deleted in split hand/splt foot protein 1 isoform 1; Deleted in split hand/splt foot protein 1 isoform 2; Uncharacterized protein (131 aa)
       
 
  0.816
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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