STRINGSTRING
Zm.84675 protein (Zea mays) - STRING interaction network
"Zm.84675" - LOC100282138 in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.84675LOC100282138 (438 aa)    
Predicted Functional Partners:
umc2401
LOC100286346 ; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)
       
  0.987
GRMZM2G454830_P01
Transcription initiation factor TFIID subunit 7-like (157 aa)
       
    0.963
GRMZM2G147614_P01
Hypothetical protein LOC100193879 (197 aa)
       
    0.963
GRMZM2G029038_P01
Uncharacterized protein (157 aa)
       
    0.963
GRMZM2G143935_P01
Annotation not available (86 aa)
       
    0.961
tbp2
TATA-box-binding protein 2 (TATA-box factor 2)(TATA-binding factor 2)(TATA sequence-binding protein 2)(TBP-2)(Transcription initiation factor TFIID TBP-2 subunit) (392 aa)
     
  0.951
TBP1
TATA-box-binding protein 1 (TATA-box factor 1)(TATA-binding factor 1)(TATA sequence-binding protein 1)(TBP-1)(Transcription initiation factor TFIID TBP-1 subunit); General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre- initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II (287 aa)
     
  0.951
pco097658
Hypothetical protein LOC100217288 (545 aa)
     
    0.950
GRMZM2G353885_P01
Transcription initiation factor TFIID subunit 2-like (361 aa)
     
    0.949
Zm.133842
Uncharacterized protein (163 aa)
     
    0.949
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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