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tdsgR38G11 protein (Zea mays) - STRING interaction network
"tdsgR38G11" - Plasma-membrane choline transporter family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdsgR38G11Plasma-membrane choline transporter family protein; Belongs to the CTL (choline transporter-like) family (499 aa)    
Predicted Functional Partners:
103649910
annotation not available (640 aa)
     
   
  0.901
GRMZM2G055585_P01
Mannan endo-14-beta-mannosidase 7; Belongs to the glycosyl hydrolase 5 (cellulase A) family (426 aa)
           
  0.799
100193009
RNA-binding (RRM/RBD/RNP motifs) family protein (826 aa)
     
 
  0.734
103637641
annotation not available (266 aa)
           
  0.730
103630654
tRNA(His) guanylyltransferase 1 (518 aa)
           
  0.730
100193673
Adenine nucleotide alpha hydrolase-like superfamily protein (165 aa)
           
  0.730
100193379
Uncharacterized protein (527 aa)
           
  0.730
GRMZM2G036007_P02
Putative PAP-specific phosphatase mitochondrial (431 aa)
           
  0.730
100273559
Uncharacterized protein (409 aa)
           
  0.730
GRMZM2G516387_P01
HEAT repeat-containing protein (527 aa)
           
  0.709
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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