STRINGSTRING
Zm.550 protein (Zea mays) - STRING interaction network
"Zm.550" - Glutathione S-transferase GSTU6 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.550Glutathione S-transferase GSTU6 (240 aa)    
Predicted Functional Partners:
gpm745b
Hypothetical protein LOC100273659 (495 aa)
       
 
  0.476
Zm.13920
Putative uncharacterized protein (550 aa)
       
 
  0.476
gata34
Putative uncharacterized protein (1460 aa)
           
  0.452
DHAR4
Hypothetical protein LOC100382696 (265 aa)
   
          0.447
DHAR3
Hypothetical protein LOC100273125 (214 aa)
   
          0.436
GRMZM5G826194_P01
Dehydroascorbate reductase (270 aa)
   
 
      0.435
pco124824
LOC100282747 (302 aa)
   
          0.428
DHAR1
Hypothetical protein LOC100191219 (214 aa)
   
          0.426
Zm.68089
Elongation factor 1-gamma 2 (414 aa)
       
 
  0.421
GRMZM2G134582_P01
Elongation factor 1-gamma 2 (414 aa)
       
 
  0.421
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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