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STRINGSTRING
GRMZM2G339523_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G339523_P01" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G339523_P01annotation not available (304 aa)    
Predicted Functional Partners:
100272608
Dual specificity protein phosphatase PHS1 (928 aa)
     
      0.754
IDP248
Homogentisate 12-dioxygenase (467 aa)
   
   
  0.674
GRMZM2G164967_P01
Carotenoid cleavage dioxygenase (611 aa)
     
   
  0.644
vp14
9-cis-epoxycarotenoid dioxygenase 1, chloroplastic; Has a 11,12(11’,12’) 9-cis epoxycarotenoid cleavage activity. Catalyzes the first step of abscisic-acid biosynthesis from carotenoids. Not active on the all-trans isomers of violaxanthin and neoxanthin. Contributes probably to abscisic acid synthesis for the induction of seed dormancy (604 aa)
     
   
  0.603
100281391
Nine-cis-epoxycarotenoid dioxygenase5; Viviparous-14 (573 aa)
     
   
  0.595
eif7
Eukaryotic translation initiation factor isoform 4E-2; Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures (216 aa)
     
   
  0.585
103643980
Diphosphomevalonate decarboxylase MVD2 (1460 aa)
     
   
  0.583
CCD8
Carotenoid cleavage dioxygenase (597 aa)
     
   
  0.580
CCD7
Carotenoid cleavage dioxygenase (624 aa)
     
   
  0.580
tdsgR83B11
Nicotinate-nucleotide pyrophosphorylase [carboxylating] chloroplastic (375 aa)
 
   
  0.578
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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