STRINGSTRING
GRMZM2G339540_P04 protein (Zea mays) - STRING interaction network
"GRMZM2G339540_P04" - Hypothetical protein LOC100279562 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G339540_P04Hypothetical protein LOC100279562 (685 aa)    
Predicted Functional Partners:
pco145505
Hypothetical protein LOC100192072 (249 aa)
     
        0.464
pco080326c
Hypothetical protein LOC100274164 (456 aa)
     
        0.455
Zm.161852
LOC100284304 (190 aa)
           
  0.418
Zm.34600
LOC100281687 (535 aa)
           
  0.418
Zm.93689
Putative uncharacterized protein (190 aa)
           
  0.404
cl50078_1
Hypothetical protein LOC100191661 (369 aa)
     
        0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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