STRINGSTRING
lls1 protein (Zea mays) - STRING interaction network
"lls1" - Lethal leaf-spot 1 Fragment in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lls1Lethal leaf-spot 1 Fragment (520 aa)    
Predicted Functional Partners:
AC203535.4_FGP004
Rieske domain containing protein (370 aa)
   
  0.816
GRMZM2G056686_P07
Hypothetical protein LOC100192754 (512 aa)
       
 
  0.741
Zm.142337
Nitrate reductase ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (877 aa)
       
  0.736
GRMZM2G076723_P01
Nitrate reductase [NADH]-like (933 aa)
       
  0.736
GRMZM2G458824_P01
Hypothetical protein LOC100272914 (332 aa)
     
 
  0.692
GRMZM2G109070_P01
Hypothetical protein LOC100274126 (491 aa)
   
 
  0.684
nar
Hypothetical protein LOC100383210 ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (890 aa)
       
  0.630
NAR1S
Nitrate reductase [NADH] Fragment (NR)(EC 1.7.1.1); Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (910 aa)
       
  0.630
GRMZM2G375064_P01
Glutamate synthase 2 [NADH], chloroplastic-like (2194 aa)
         
    0.618
Zm.24266
Uncharacterized protein (2187 aa)
         
    0.618
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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