STRINGSTRING
GRMZM2G342539_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G342539_P01" - Fiber protein Fb34 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G342539_P01Fiber protein Fb34 (142 aa)    
Predicted Functional Partners:
Zm.1008
Actin binding protein (841 aa)
           
  0.526
GRMZM2G139900_P01
Hypothetical protein LOC100193804 (140 aa)
     
        0.440
GRMZM2G023242_P04
Hypothetical protein LOC100193616 (174 aa)
     
        0.437
CADR16
DNA polymerase epsilon subunit 3 (175 aa)
     
        0.411
GRMZM2G358693_P02
Hypothetical protein LOC100384238 (885 aa)
           
  0.407
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (7%) [HD]