STRINGSTRING
GRMZM2G342539_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G342539_P01" - Fiber protein Fb34 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G342539_P01Fiber protein Fb34 (142 aa)    
Predicted Functional Partners:
103645756
annotation not available (538 aa)
           
  0.808
pco095461
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (207 aa)
           
  0.808
sod2
Superoxide dismutase [Cu-Zn] 2; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (210 aa)
     
   
  0.544
100282741
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (163 aa)
           
  0.506
sod4
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (152 aa)
           
  0.506
sod9
Superoxide dismutase [Cu-Zn] 4AP; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (152 aa)
           
  0.506
GRMZM2G096228_P01
Caltractin (179 aa)
           
  0.487
100284444
Caltractin1; Caltractin; Uncharacterized protein (172 aa)
           
  0.487
100193804
40S ribosomal protein S12 ; Belongs to the eukaryotic ribosomal protein eS12 family (140 aa)
     
        0.468
100193616
Nascent polypeptide-associated complex subunit beta; Transcription factor BTF3; Uncharacterized protein (174 aa)
     
        0.461
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (9%) [HD]