STRINGSTRING
Zm.32111 protein (Zea mays) - STRING interaction network
"Zm.32111" - Uncharacterized LOC103645753 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.32111Uncharacterized LOC103645753 (901 aa)    
Predicted Functional Partners:
AC190788.2_FGP005
Uncharacterized protein (168 aa)
 
   
  0.697
GRMZM2G093623_P01
DNA mismatch repair protein MSH3 (223 aa)
 
   
  0.676
Zm.431
Sigma-like factor6 (542 aa)
   
      0.626
Zm.12554
Sigma factor protein (568 aa)
   
      0.613
GRMZM5G813933_P01
Uncharacterized protein (287 aa)
   
      0.613
Zm.13256
RNA polymerase sigma factor 2 Fragment (504 aa)
   
      0.613
Zm.430
Sigma-like factor2B (528 aa)
   
      0.613
Zm.429
Sigma factor SIG2A (539 aa)
   
      0.613
sig2B
Sigma-like factor2B (528 aa)
   
      0.613
Zm.101574
RNA polymerase sigma factor sigE, chloroplastic/mitochondrial (497 aa)
   
      0.613
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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