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STRINGSTRING
GRMZM2G348956_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G348956_P01" - annotation not available in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G348956_P01annotation not available (901 aa)    
Predicted Functional Partners:
GRMZM2G703415_P01
DEAD-box ATP-dependent RNA helicase 40 (1353 aa)
 
     
  0.969
crs4
annotation not available (1438 aa)
   
   
  0.860
crs3
Chloroplast RNA splicing4 (1435 aa)
     
   
  0.842
phm5822
annotation not available (787 aa)
           
  0.664
542081
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released (568 aa)
 
 
  0.628
103626016
annotation not available (739 aa)
   
   
  0.618
100191385
Pentatricopeptide repeat53 (716 aa)
     
   
  0.604
GRMZM2G475897_P01
Pentatricopeptide repeat*-GRMZM2G475897 (853 aa)
           
  0.598
GRMZM2G035497_P01
annotation not available (96 aa)
           
  0.598
AC190788.2_FGP005
annotation not available (168 aa)
 
   
  0.576
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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