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STRINGSTRING
100283980 protein (Zea mays) - STRING interaction network
"100283980" - Lipid binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100283980Lipid binding protein; Putative lipid-binding serum glycoprotein domain family protein; Uncharacterized protein (484 aa)    
Predicted Functional Partners:
100281145
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Belongs to the iron/ascorbate-dependent oxidoreductase family (357 aa)
           
  0.710
CFM3
CRM-domain containing factor CFM3, chloroplastic/mitochondrial; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2. May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity) (1523 aa)
       
 
  0.549
100193201
RNA-binding (RRM/RBD/RNP motifs) family protein; Heterogeneous nuclear ribonucleoprotein 27C isoform 1; Heterogeneous nuclear ribonucleoprotein 27C isoform 2; Heterogeneous nuclear ribonucleoprotein 27C isoform 3; Heterogeneous nuclear ribonucleoprotein 27C isoform 4; Heterogeneous nuclear ribonucleoprotein 27C isoform 5; Uncharacterized protein (360 aa)
           
  0.538
100285224
RNA-binding (RRM/RBD/RNP motifs) family protein (360 aa)
           
  0.538
GRMZM2G426175_P01
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Belongs to the iron/ascorbate-dependent oxidoreductase family (292 aa)
           
  0.522
100285776
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Leucoanthocyanidin dioxygenase; Uncharacterized protein ; Belongs to the iron/ascorbate-dependent oxidoreductase family (353 aa)
           
  0.522
GRMZM5G806108_P01
annotation not available (414 aa)
           
  0.512
pco065250b
Protein kinase superfamily protein (682 aa)
           
  0.512
100193371
RING/FYVE/PHD zinc finger superfamily protein (382 aa)
           
  0.461
100284488
RING/FYVE/PHD zinc finger superfamily protein (259 aa)
           
  0.461
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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