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Zm.22513 protein (Zea mays) - STRING interaction network
"Zm.22513" - Root phototropism protein 2-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.22513Root phototropism protein 2-like (577 aa)    
Predicted Functional Partners:
Zm.75888
Phototropin-1 (905 aa)
       
 
  0.808
Zm.1519
Blue-light receptor phototropin 1 (761 aa)
       
 
  0.808
GRMZM2G032505_P03
Hypothetical protein LOC100274559 (430 aa)
           
  0.436
AY105910
Hypothetical protein LOC100273594 (449 aa)
           
  0.436
phyA1
Hypothetical protein LOC100384268 (LOC100384268), mRNA; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1131 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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