STRINGSTRING
ago2b protein (Zea mays) - STRING interaction network
"ago2b" - Argonaute2b in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ago2bArgonaute2b; Putative argonaute family protein ; Belongs to the argonaute family (1039 aa)    
Predicted Functional Partners:
dcl103
Dicer-like 103 (306 aa)
     
 
  0.821
GRMZM2G024466_P01
Dicer-like 103; Belongs to the helicase family. Dicer subfamily (511 aa)
     
 
  0.821
dcl101
Dicer-like 101; Belongs to the helicase family. Dicer subfamily (1307 aa)
     
 
  0.811
100279204
Dicer-like 104; Belongs to the helicase family. Dicer subfamily (595 aa)
     
 
  0.768
dcl102
annotation not available (1517 aa)
     
 
  0.768
100192986
Dicer-like 105; Belongs to the helicase family. Dicer subfamily (707 aa)
     
 
  0.761
GRMZM2G153627_P01
annotation not available (251 aa)
     
 
  0.761
GRMZM2G001631_P01
annotation not available (462 aa)
     
 
  0.761
pco123260
Protein DCL chloroplastic (235 aa)
           
  0.742
mop1
RNA-dependent RNA polymerase; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs) (1127 aa)
           
  0.718
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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