STRINGSTRING
VTC2 protein (Zea mays) - STRING interaction network
"VTC2" - Hypothetical protein LOC100272546 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTC2Hypothetical protein LOC100272546 (451 aa)    
Predicted Functional Partners:
gpm480
Hypothetical protein LOC100280325 (371 aa)
         
  0.904
IDP512
Hypothetical protein LOC100192102 (380 aa)
         
  0.904
GRMZM2G034417_P02
Uncharacterized protein (125 aa)
         
  0.904
GRMZM2G029731_P01
Inositol-1-monophosphatase (216 aa)
         
  0.904
GRMZM2G057186_P01
VTC2 (435 aa)
         
 
0.800
vde1
Violaxanthin de-epoxidase (446 aa)
           
  0.564
DHAR4
Hypothetical protein LOC100382696 (265 aa)
           
  0.529
DHAR3
Hypothetical protein LOC100273125 (214 aa)
           
  0.528
DHAR1
Hypothetical protein LOC100191219 (214 aa)
           
  0.528
GRMZM2G440596_P01
Annotation not available (475 aa)
           
  0.454
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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