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STRINGSTRING
100502508 protein (Zea mays) - STRING interaction network
"100502508" - RING/U-box superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
100502508RING/U-box superfamily protein (260 aa)    
Predicted Functional Partners:
sumo2
Ubiquitin-like protein SMT3 (110 aa)
       
 
  0.870
100281934
Small ubiquitin-related modifier; SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
       
 
  0.870
SUMO1a
SUMO1a protein; Ubiquitin-like protein SMT3; Uncharacterized protein (99 aa)
       
 
  0.870
DSUL
Di-SUMO-like protein (250 aa)
       
 
  0.870
GRMZM2G097364_P01
KxDL motif CG10681-like protein (164 aa)
       
      0.812
103630794
TATA-binding protein-associated factor BTAF1 (2031 aa)
     
   
  0.658
pco110680
Peroxisome biogenesis factor 10 (387 aa)
       
 
  0.599
GRMZM2G406643_P01
annotation not available (141 aa)
       
      0.597
103633261
Ubiquitin-60S ribosomal protein L40-1; Ubiquitin fusion protein; Uncharacterized protein (129 aa)
       
      0.597
AC233910.1_FGP003
UBiQuitin family member (143 aa)
       
      0.597
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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