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STRINGSTRING
AGAMOUS protein (Zea mays) - STRING interaction network
AGAMOUS-like protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGAMOUSAGAMOUS-like protein; Zea mays MADS2 (259 aa)    
Predicted Functional Partners:
542504
DNA helicase; Belongs to the MCM family (720 aa)
       
 
  0.685
zfl1
Zea floricaula/leafy1 (391 aa)
       
 
  0.640
GRMZM2G149802_P01
DNA polymerase (1528 aa)
       
 
  0.608
103645994
Floricaula/leafy-like 2 (394 aa)
       
 
  0.594
GRMZM2G451254_P01
Histone H3 (136 aa)
       
 
  0.562
103636448
VAMP-like protein YKT62; Histone H3 ; Belongs to the synaptobrevin family (359 aa)
       
 
  0.562
100192746
Histone H3 (171 aa)
       
 
  0.562
103638137
Histone H3 (136 aa)
       
 
  0.562
100381287
Histone H3 (136 aa)
       
 
  0.562
GRMZM2G118355_P02
Histone H3 (247 aa)
       
 
  0.562
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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