STRINGSTRING
umc2613 protein (Zea mays) - STRING interaction network
"umc2613" - Hypothetical protein LOC100273919 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc2613Hypothetical protein LOC100273919 (1130 aa)    
Predicted Functional Partners:
GRMZM2G062638_P01
Hypothetical protein LOC100384790 (648 aa)
     
        0.555
GRMZM2G060817_P02
Hypothetical protein LOC100191510 (885 aa)
     
        0.554
Zm.32354
Putative uncharacterized protein (558 aa)
     
        0.512
GRMZM2G067242_P01
Putative uncharacterized protein (644 aa)
     
        0.495
Zm.629
RNA polymerase T phage-like 1 ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (975 aa)
     
        0.490
GRMZM2G128092_P01
Transducin beta-like protein 3 (886 aa)
     
        0.490
Zm.84509
Uncharacterized LOC103644204 (465 aa)
     
        0.471
GRMZM2G075027_P01
Hypothetical protein LOC100193011 (455 aa)
     
        0.466
MUS1
DNA mismatch repair protein MSH2 (MUS1); Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair (By similarity) (942 aa)
     
        0.459
Zm.28003
LOC100282763 (409 aa)
     
        0.456
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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