STRINGSTRING
Zm.5982 protein (Zea mays) - STRING interaction network
"Zm.5982" - DNA mismatch repair protein in Zea mays
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.5982DNA mismatch repair protein (1131 aa)    
Predicted Functional Partners:
GRMZM2G392172_P01
Uncharacterized protein (855 aa)
     
  0.995
AC193754.3_FGP008
Uncharacterized protein (679 aa)
     
  0.995
MUS1
DNA mismatch repair protein MSH2 (MUS1); Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair (By similarity) (942 aa)
     
0.992
ZmPCNA2
Proliferating cell nuclear antigen2 ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.983
PCNA
Proliferating cell nuclear antigen (PCNA); This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
  0.983
GRMZM2G356935_P01
Uncharacterized protein (673 aa)
   
  0.982
GRMZM2G058441_P02
Uncharacterized protein (316 aa)
   
  0.982
GRMZM2G424383_P01
Annotation not available (393 aa)
   
  0.981
GRMZM2G135491_P01
Annotation not available (146 aa)
   
  0.981
GRMZM2G133952_P01
DNA mismatch repair protein MLH1 (724 aa)
   
  0.981
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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