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STRINGSTRING
MSH1 protein (Zea mays) - STRING interaction network
"MSH1" - DNA mismatch repair protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSH1DNA mismatch repair protein (1131 aa)    
Predicted Functional Partners:
GRMZM2G392172_P01
annotation not available (855 aa)
     
 
  0.988
AC193754.3_FGP008
annotation not available (679 aa)
     
 
  0.988
GRMZM2G093623_P01
DNA mismatch repair protein MSH3; Component of the post-replicative DNA mismatch repair system (MMR) (223 aa)
     
 
  0.981
mus1
DNA mismatch repair protein MSH2; Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair (By similarity) (942 aa)
     
 
0.978
GRMZM2G149802_P01
DNA polymerase (1528 aa)
     
 
  0.978
100381612
Structural maintenance of chromosomes protein 5 (1057 aa)
     
 
  0.965
GRMZM2G313272_P01
annotation not available (742 aa)
   
 
  0.965
GRMZM2G426847_P01
annotation not available (349 aa)
     
 
  0.964
103627197
annotation not available (1856 aa)
     
 
  0.964
magi81248
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (263 aa)
     
 
  0.962
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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