STRINGSTRING
Zm.669 protein (Zea mays) - STRING interaction network
"Zm.669" - Alpha-expansin 5 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.669Alpha-expansin 5 (294 aa)    
Predicted Functional Partners:
expA1
Alpha expansin1 (253 aa)
     
   
  0.885
expB4
Beta-expansin 4 (308 aa)
     
   
  0.754
expA3
LOC541905 (262 aa)
           
  0.721
xet1
Xyloglucan endotransglycosylase homolog1 (394 aa)
           
  0.721
Zm.142872
Beta-expansin 1aPutative uncharacterized protein ; (282 aa)
           
  0.721
GRMZM2G019398_P01
expansin-A19-like (254 aa)
           
  0.721
Zm.94382
Beta-expansin 7 (322 aa)
           
  0.720
GRMZM2G148374_P01
Hypothetical protein LOC100383904 (951 aa)
           
  0.630
Zm.14838
Proton-exporting ATPase Fragment (EC 3.6.3.6) (961 aa)
           
  0.569
expA4
Alpha-expansin 6 (265 aa)
           
  0.566
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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