STRINGSTRING
GRMZM2G361986_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G361986_P01" - Transcription initiation factor IIB-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G361986_P01Transcription initiation factor IIB-like (311 aa)    
Predicted Functional Partners:
GRMZM2G434353_P01
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (361 aa)
   
  0.981
GRMZM2G392683_P01
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (339 aa)
   
  0.981
GRMZM2G049198_P01
Annotation not available (290 aa)
   
  0.980
GRMZM2G409219_P01
Annotation not available (177 aa)
   
  0.979
IDP825
DNA-directed RNA polymerase II 36 kDa polypeptide A (328 aa)
     
  0.979
umc2401
LOC100286346 ; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (106 aa)
     
  0.978
GRMZM2G466938_P01
TATA-box-binding protein 1-like (189 aa)
     
  0.978
tbp2
TATA-box-binding protein 2 (TATA-box factor 2)(TATA-binding factor 2)(TATA sequence-binding protein 2)(TBP-2)(Transcription initiation factor TFIID TBP-2 subunit) (392 aa)
     
  0.978
TBP1
TATA-box-binding protein 1 (TATA-box factor 1)(TATA-binding factor 1)(TATA sequence-binding protein 1)(TBP-1)(Transcription initiation factor TFIID TBP-1 subunit); General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre- initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II (287 aa)
     
  0.978
GRMZM2G092916_P01
Uncharacterized protein (212 aa)
     
  0.978
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (15%) [HD]