STRINGSTRING
LOB38 protein (Zea mays) - STRING interaction network
"LOB38" - Hypothetical protein LOC100382144 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOB38Hypothetical protein LOC100382144 (299 aa)    
Predicted Functional Partners:
PHD13
LOC100281389 (558 aa)
           
  0.720
GRMZM2G099491_P01
Hypothetical protein LOC100191200 (379 aa)
           
  0.712
Zm.92950
Hypothetical protein LOC100275404 (549 aa)
           
  0.710
SIP1-1
Aquaporin SIP1-1 (Small basic intrinsic protein 1-1)(ZmSIP1-1)(ZmSIP1;1); Aquaporins facilitate the transport of water and small neutral solutes across cell membranes (245 aa)
           
  0.621
arf10
Hypothetical protein LOC100274571 (LOC100274571), mRNA; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (822 aa)
           
  0.529
GRMZM2G153920_P01
Sorbitol transporter (525 aa)
           
  0.529
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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