STRINGSTRING
arid1 protein (Zea mays) - STRING interaction network
"arid1" - AT-rich interactive domain-containing protein 1-like in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arid1AT-rich interactive domain-containing protein 1-like (814 aa)    
Predicted Functional Partners:
Zm.130127
Uncharacterized protein (48 aa)
           
  0.721
GRMZM2G354579_P02
Uncharacterized protein (380 aa)
           
  0.721
GRMZM2G354558_P01
Omega-3 fatty acid desaturase (402 aa)
           
  0.721
GRMZM2G144594_P01
Uncharacterized protein (373 aa)
           
  0.721
Zm.95117
LOC100191323 (umc2562), mRNA (331 aa)
           
  0.721
cl44325_1
Hypothetical protein LOC100280181 (439 aa)
           
  0.685
Zm.27749
Putative beta-glycosidase (656 aa)
           
  0.621
Zm.17790
PAN1 (662 aa)
           
  0.530
EZ1
Histone-lysine N-methyltransferase EZ1 (EC 2.1.1.43)(Enhancer of zeste protein 1); Polycomb group (PcG) protein. Catalytic subunit of some PcG multiprotein complex, which methylates ’Lys-27’ of histone H3, leading to transcriptional repression of the affected target genes. PcG proteins are not required to initiate repression, but to maintain it during later stages of development (By similarity) (931 aa)
           
  0.525
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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