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STRINGSTRING
phd4 protein (Zea mays) - STRING interaction network
"phd4" - RING/FYVE/PHD-type zinc finger family protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phd4RING/FYVE/PHD-type zinc finger family protein (819 aa)    
Predicted Functional Partners:
gpm667
Retinoblastoma-binding protein-like (589 aa)
     
 
  0.747
GRMZM2G411032_P01
Putative RING zinc finger domain superfamily protein isoform 1; Putative RING zinc finger domain superfamily protein isoform 2 (806 aa)
           
  0.705
phd22
annotation not available (727 aa)
           
  0.705
GRMZM2G453008_P01
Protein TRAUCO (226 aa)
     
 
  0.664
GRMZM2G145666_P01
Protein TRAUCO (454 aa)
     
 
  0.664
GRMZM2G306859_P01
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (283 aa)
     
   
  0.644
phd21
Uncharacterized protein (108 aa)
     
   
  0.644
GRMZM2G156121_P01
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (394 aa)
     
   
  0.644
phd32
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (849 aa)
     
   
  0.644
alf12
PHD finger protein; Uncharacterized protein (241 aa)
     
 
  0.643
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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