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pco142939 protein (Zea mays) - STRING interaction network
"pco142939" - Hypothetical protein LOC100273563 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pco142939Hypothetical protein LOC100273563 (581 aa)    
Predicted Functional Partners:
Atg8d
Autophagy-related 8e (119 aa)
     
        0.730
Zm.26063
E3 ubiquitin-protein ligase UPL4 (1210 aa)
     
 
    0.630
Zm.25284
Putative hect E3 ubiquitin ligase Fragment (1759 aa)
     
 
    0.628
GRMZM2G124297_P01
E3 ubiquitin-protein ligase UPL4-like (998 aa)
     
 
    0.628
Zm.84476
E3 ubiquitin-protein ligase UPL3-like (1877 aa)
     
 
    0.628
GRMZM2G108138_P02
Hypothetical protein LOC100274428 (544 aa)
     
        0.607
GRMZM2G023313_P01
Hypothetical protein LOC100192591 (199 aa)
     
        0.601
Zm.81412
Hypothetical protein LOC100277911 (86 aa)
     
        0.548
GRMZM2G087635_P01
Hypothetical protein LOC100191967 (487 aa)
     
   
  0.547
GRMZM2G366065_P02
Hypothetical protein LOC100382433 (582 aa)
           
  0.546
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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