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Zm.150049 protein (Zea mays) - STRING interaction network
"Zm.150049" - DEAD-box ATP-dependent RNA helicase 27-like in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.150049DEAD-box ATP-dependent RNA helicase 27-like (415 aa)    
Predicted Functional Partners:
GRMZM2G104983_P01
Putative uncharacterized protein (853 aa)
     
      0.995
GRMZM2G323838_P01
Uncharacterized protein (408 aa)
     
 
  0.995
pco136431
LOC100280505 ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (619 aa)
     
 
  0.995
GRMZM2G334676_P03
Uncharacterized protein (727 aa)
     
  0.994
cl47231_1a
Hypothetical protein LOC100274080 (786 aa)
   
 
0.993
Zm.94356
ATP-dependent RNA helicase DRS1 (770 aa)
   
 
0.993
gras39
Uncharacterized protein (251 aa)
   
 
  0.992
Zm.122753
Hypothetical protein LOC100274701 (594 aa)
   
 
  0.992
GRMZM2G140602_P01
Hypothetical protein LOC100193077 (592 aa)
   
 
  0.992
TIDP3557
Hypothetical protein LOC100274162 (375 aa)
   
 
  0.992
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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