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STRINGSTRING
def1 protein (Zea mays) - STRING interaction network
"def1" - Defensin-like protein 1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
def1Defensin-like protein 1 ; Belongs to the DEFL family (79 aa)    
Predicted Functional Partners:
def2
Defensin-like protein 2 (121 aa)
           
  0.745
GRMZM2G032198_P01
annotation not available (83 aa)
           
  0.730
pco080661a
Hevein-like preproprotein (149 aa)
     
   
  0.690
GRMZM2G467187_P01
E3 ubiquitin-protein ligase ATL6 (377 aa)
     
   
  0.587
732783
Single-stranded nucleic acid binding R3H protein; DIP1; Uncharacterized protein (349 aa)
           
  0.560
umc1318
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (140 aa)
     
   
  0.491
HP3
Histidine-containing phosphotransfer protein 5 (200 aa)
     
   
  0.489
isr1
Inhibitor of striate1 (453 aa)
           
  0.489
dbf1
DRE-binding protein 1; DRE binding factor 1 (276 aa)
           
  0.485
100280180
Monothiol glutaredoxin-S15 mitochondrial; Grx_S15.2-glutaredoxin subgroup II; Uncharacterized protein (193 aa)
           
  0.400
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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