STRINGSTRING
gpm470 protein (Zea mays) - STRING interaction network
"gpm470" - LOC100281790 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpm470LOC100281790 (203 aa)    
Predicted Functional Partners:
ZmGR1b
GR1a protein (133 aa)
     
     
0.786
umc1162
LOC100283627 (239 aa)
     
        0.782
GRMZM2G060811_P01
Hypothetical protein LOC100276306 (104 aa)
     
        0.769
GRMZM2G162276_P01
Hypothetical protein LOC100273254 (133 aa)
     
     
0.739
Zm.85569
LOC100276997 (umc1273), mRNA (384 aa)
     
        0.601
expB4
Beta-expansin 4 (308 aa)
     
        0.584
AY110473
Hypothetical protein LOC100279500 (1064 aa)
     
        0.561
Zm.1046
Lipid transfer-like protein VAS (175 aa)
     
        0.485
GRMZM2G156365_P04
Hypothetical protein LOC100280212 (519 aa)
     
        0.469
GRMZM2G045215_P01
Anther-specific proline-rich protein APG (369 aa)
     
        0.469
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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