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STRINGSTRING
umc1263 protein (Zea mays) - STRING interaction network
"umc1263" - BRCT domain-containing DNA repair protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1263BRCT domain-containing DNA repair protein (639 aa)    
Predicted Functional Partners:
100383441
Structural maintenance of chromosomes protein 6B (1040 aa)
     
 
  0.916
FHA2
DNA damage signaling and repair protein (557 aa)
     
 
  0.797
103627300
annotation not available (291 aa)
       
 
  0.789
100381612
Structural maintenance of chromosomes protein 5 (1057 aa)
     
 
  0.761
GRMZM2G453008_P01
Protein TRAUCO (226 aa)
       
 
  0.740
GRMZM2G145666_P01
Protein TRAUCO (454 aa)
       
 
  0.740
GRMZM2G306348_P01
ATP-dependent DNA helicase Q-like 5 (1256 aa)
     
 
  0.702
umc2030
Increased DNA methylation 1 (1316 aa)
     
 
  0.681
100274706
ATP-dependent DNA helicase Q-like 4A (750 aa)
     
 
  0.681
GRMZM2G106732_P01
annotation not available (898 aa)
     
 
  0.681
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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