STRINGSTRING
CA5P6 protein (Zea mays) - STRING interaction network
"CA5P6" - Nuclear transcription factor Y subunit C-9 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA5P6Nuclear transcription factor Y subunit C-9 (129 aa)    
Predicted Functional Partners:
CADR16
DNA polymerase epsilon subunit 3; Uncharacterized protein (175 aa)
     
 
  0.886
ca3p4
Nuclear transcription factor Y subunit B-3 (212 aa)
     
 
  0.761
103647828
annotation not available (205 aa)
     
 
  0.761
cadtfr9
annotation not available (105 aa)
     
 
  0.753
ca3p2
annotation not available (91 aa)
     
 
  0.753
ca2p2
annotation not available (131 aa)
     
 
  0.752
cl982_-1b
Retrovirus-related Pol polyprotein LINE-1; Nuclear transcription factor Y subunit A-7 (214 aa)
     
 
  0.752
CA2P12
Nuclear transcription factor Y subunit A-7 (215 aa)
     
 
  0.752
GRMZM2G154267_P01
DNA polymerase epsilon subunit 2 (533 aa)
     
 
  0.742
cadtfr4
annotation not available (200 aa)
     
 
  0.723
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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