• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
umc1549a protein (Zea mays) - STRING interaction network
"umc1549a" - RNA polymerase II Rpb4 core protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1549aRNA polymerase II Rpb4 core protein; Calcitonin peptide-receptor component protein; Uncharacterized protein (152 aa)    
Predicted Functional Partners:
pco137632
Uncharacterized protein (106 aa)
     
 
  0.982
100281221
RNA polymerase Rpb7 N-terminal domain-containing protein (290 aa)
     
 
  0.981
100193056
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (110 aa)
     
 
  0.979
GRMZM2G061890_P03
annotation not available (507 aa)
     
 
  0.978
tdsgR70F12
SIN-like family protein (677 aa)
     
 
  0.978
100191943
RNA polymerase I subunit 43 (372 aa)
     
 
  0.976
100283887
RNA polymerase III RPC4; DNA binding protein; Uncharacterized protein (300 aa)
     
 
  0.961
100193764
RNA polymerase III RPC4 (311 aa)
     
 
  0.961
GRMZM2G178236_P01
annotation not available (336 aa)
     
 
  0.957
103646285
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1030 aa)
     
 
  0.957
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (11%) [HD]