STRINGSTRING
rth3 protein (Zea mays) - STRING interaction network
"rth3" - Roothair defective3 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rth3Roothair defective3 (667 aa)    
Predicted Functional Partners:
AUX34
Hypothetical protein LOC100193994 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (486 aa)
           
  0.721
rth1
Roothairless 1 (889 aa)
           
  0.721
rtcs
Rootless concerning crown and seminal lateral roots (244 aa)
           
  0.721
Zm.118897
WD repeat-containing protein 74-like (461 aa)
           
  0.720
GRMZM2G153722_P01
Putative 1-phosphatidylinositol-4-phosphate 5-kinase/ zinc ion binding family (1796 aa)
           
  0.720
aprl2
Adenosine 5’-phosphosulfate reductase 2 (456 aa)
           
  0.720
GRMZM2G070837_P01
Disco-interacting protein 2 homolog A-like (655 aa)
           
  0.720
GRMZM2G053511_P01
Hypothetical protein LOC100194163 (220 aa)
           
  0.720
umc1554
Hypothetical protein LOC100274215 (368 aa)
           
  0.720
PDC2
Pyruvate decarboxylase isozyme 2 Fragment (PDC)(EC 4.1.1.1) (640 aa)
           
  0.564
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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