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STRINGSTRING
rth3 protein (Zea mays) - STRING interaction network
"rth3" - COBRA-like protein 7 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rth3COBRA-like protein 7 (667 aa)    
Predicted Functional Partners:
100193994
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (486 aa)
           
  0.745
rth1
Roothairless 1 (889 aa)
           
  0.745
103637736
annotation not available (1159 aa)
           
  0.740
103647994
annotation not available (462 aa)
           
  0.739
100272244
Apyrase 1; Belongs to the GDA1/CD39 NTPase family (467 aa)
           
  0.739
103634608
annotation not available (478 aa)
           
  0.739
100381419
Putative apyrase family protein; Uncharacterized protein ; Belongs to the GDA1/CD39 NTPase family (464 aa)
           
  0.739
103647945
annotation not available (466 aa)
           
  0.739
rum1
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (269 aa)
           
  0.730
103636726
Transcription factor bHLH83 (325 aa)
     
   
  0.689
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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