STRINGSTRING
ARF13 protein (Zea mays) - STRING interaction network
"ARF13" - Hypothetical protein LOC100274564 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF13Hypothetical protein LOC100274564 ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (850 aa)    
Predicted Functional Partners:
AUX27
Hypothetical protein LOC100273242 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (294 aa)
       
 
0.954
AUX3
Hypothetical protein LOC100193444 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (220 aa)
           
  0.720
PRO5
Profilin-5 (ZmPRO5); Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG. Has a high affinity for poly-proline (131 aa)
           
  0.562
Zm.87072
Putative uncharacterized protein ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (812 aa)
     
     
0.477
Zm.85210
Hypothetical protein LOC100279001 (LOC100279001), mRNA (1108 aa)
     
        0.469
pco097932
Hypothetical protein LOC100272651 (807 aa)
     
        0.452
Zm.19610
Uncharacterized protein (3634 aa)
     
        0.437
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (16%) [HD]