STRINGSTRING
Zm.2122 protein (Zea mays) - STRING interaction network
"Zm.2122" - Uncharacterized protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.2122Uncharacterized protein (588 aa)    
Predicted Functional Partners:
SSRP1
FACT complex subunit SSRP1 (Facilitates chromatin transcription complex subunit SSRP1)(Recombination signal sequence recognition protein 1)(Zm-SSRP1); Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by pr [...] (651 aa)
     
  0.958
GRMZM2G021270_P01
Hypothetical protein LOC100193866 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1412 aa)
     
  0.956
GRMZM2G079693_P01
Annotation not available (1081 aa)
   
  0.895
mybr110
Uncharacterized protein (677 aa)
     
  0.889
GRMZM2G126913_P02
Uncharacterized protein (762 aa)
     
  0.874
GRMZM2G468367_P01
Uncharacterized protein (492 aa)
     
  0.851
GRMZM2G358121_P01
Tetratricopeptide repeat protein 37 (407 aa)
     
  0.838
Zm.154463
Uncharacterized protein (971 aa)
     
  0.810
phd41
Putative uncharacterized protein (982 aa)
     
  0.810
Zm.107195
Putative RNA polymerase II 140kD subunit Fragment (362 aa)
     
  0.810
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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