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STRINGSTRING
cl22372_1b protein (Zea mays) - STRING interaction network
"cl22372_1b" - Chaperone DnaJ-domain superfamily protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cl22372_1bChaperone DnaJ-domain superfamily protein (396 aa)    
Predicted Functional Partners:
GRMZM2G082836_P01
GTP-binding protein 1; ARF-related protein; Uncharacterized protein ; Belongs to the small GTPase superfamily. Arf family (202 aa)
           
  0.714
GRMZM5G809335_P01
Succinate dehydrogenase subunit 8A mitochondrila (58 aa)
           
  0.611
100383868
Signal recognition particle 14 kDa protein (131 aa)
           
  0.601
100279595
Transcription factor TCP14 (379 aa)
       
      0.582
tcptf9
Transcription factor TCP14 (402 aa)
       
      0.582
TCP26
annotation not available (400 aa)
       
      0.582
GRMZM2G047365_P01
Sphingomyelin synthetase family protein (442 aa)
     
        0.571
TCP14
Transcription factor TCP21 (207 aa)
       
      0.557
TCP4
Transcription factor TCP21 (207 aa)
       
      0.557
TCP16
annotation not available (220 aa)
       
      0.557
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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