Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Protein LOW PSII ACCUMULATION 1 chloroplastic (374 aa)
Predicted Functional Partners:
Protein LOW PSII ACCUMULATION 2 chloroplastic (171 aa)
Protein HHL1 chloroplastic (249 aa)
Protein PAM68 chloroplastic; ABC-type Co2+ transport system, permease component; Uncharacterized protein (215 aa)
ABC-type Co2+ transport system, permease component; Uncharacterized protein (215 aa)
Photosystem II1; Plastid high chlorophyll fluorescence 136 (394 aa)
Photosystem II protein D1; Photosystem II (PSII) is a light-driven water- plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors (227 aa)
Uncharacterized protein (204 aa)
Uncharacterized protein ycf72 (227 aa)
Chloroplast protein HCF243 (828 aa)
annotation not available (947 aa)
Your Current Organism:
NCBI taxonomy Id: 4577 Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize