STRINGSTRING
GRMZM2G384338_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G384338_P01" - RNA binding protein in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G384338_P01RNA binding protein (179 aa)    
Predicted Functional Partners:
GRMZM2G045818_P01
Ribosomal protein S11 containing protein (252 aa)
           
  0.546
HMG7
Nucleosome/chromatin assembly factor D (212 aa)
           
  0.529
GRMZM2G180605_P01
Hypothetical protein LOC100276597 (422 aa)
           
  0.482
GRMZM2G054149_P01
50S ribosomal protein L21 (227 aa)
           
  0.457
umc1313
50S ribosomal protein L21 (231 aa)
           
  0.457
GRMZM2G153648_P10
Hypothetical protein LOC100276149 (109 aa)
           
  0.453
Zm.23253
Putative uncharacterized protein (119 aa)
           
  0.453
Zm.84718
Hypothetical protein LOC100191497 (673 aa)
           
  0.414
Zm.83044
Hypothetical protein LOC100194267 (250 aa)
           
  0.412
ARID6
ARID transcription factor (453 aa)
           
  0.402
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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