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Zm.87080 protein (Zea mays) - STRING interaction network
"Zm.87080" - Hypothetical protein LOC100274838 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.87080Hypothetical protein LOC100274838 (118 aa)    
Predicted Functional Partners:
zcn10
ZCN10 protein (172 aa)
           
  0.545
ZCN10
ZCN10 protein (172 aa)
           
  0.545
zcn9
ZCN9 protein (190 aa)
           
  0.526
EIF6
Eukaryotic translation initiation factor 6 ; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis (245 aa)
     
        0.466
GRMZM2G133021_P01
Hypothetical protein LOC100382330 (424 aa)
     
        0.466
GRMZM2G134980_P01
Hypothetical protein LOC100280317 (419 aa)
     
        0.428
GRMZM2G360339_P04
LOC100286358 (141 aa)
     
        0.420
GRMZM2G012628_P01
Hypothetical protein LOC100382170 (432 aa)
     
        0.416
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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