STRINGSTRING
core3ft protein (Zea mays) - STRING interaction network
"core3ft" - 3-alpha-L-fucosyltransferase in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
core3ft3-alpha-L-fucosyltransferase (498 aa)    
Predicted Functional Partners:
GRMZM2G156013_P01
Serine/threonine protein kinase (415 aa)
           
  0.541
GRMZM2G084515_P01
Hypothetical protein LOC100381400 (446 aa)
     
   
  0.536
GRMZM5G817350_P01
Uncharacterized protein (389 aa)
           
  0.528
GRMZM2G373936_P01
Uncharacterized protein (219 aa)
           
  0.528
GRMZM2G426275_P01
Hypothetical protein LOC100274447 (442 aa)
           
  0.521
Zm.32529
UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase (422 aa)
     
   
  0.492
GRMZM2G137707_P01
Hypothetical protein LOC100274497 (422 aa)
     
   
  0.492
GRMZM2G443903_P01
Hypothetical protein LOC100192858 (1202 aa)
     
   
  0.464
GRMZM2G158474_P01
Annotation not available (531 aa)
     
   
  0.445
GRMZM2G019783_P01
Hypothetical protein LOC100192871 (513 aa)
           
  0.436
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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