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GRMZM2G387890_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G387890_P01" - Chromatin structure-remodeling complex protein SYD in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G387890_P01Chromatin structure-remodeling complex protein SYD (951 aa)    
Predicted Functional Partners:
103638205
Helicase protein MOM1 (1990 aa)
     
 
  0.985
103647912
annotation not available (1758 aa)
     
 
  0.951
103633530
annotation not available (1525 aa)
     
 
  0.951
103630545
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1622 aa)
     
 
  0.939
100191936
Chromatin structure-remodeling complex protein BSH; SWI/SNF, matrix-associated, actin-dependent regulator of chromatin subfamily B member 1; Uncharacterized protein (255 aa)
     
 
  0.931
ARID6
annotation not available (453 aa)
     
 
  0.922
GRMZM2G052416_P01
SWI/SNF complex component SNF12-like protein (532 aa)
     
 
  0.921
pco093035
Actin-related protein 4; Belongs to the actin family (443 aa)
     
 
  0.918
100216988
annotation not available (1475 aa)
     
 
  0.909
rs55625046
Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1; Putative SNF2 domain-containing protein / helicase domain-containing protein (724 aa)
     
 
  0.909
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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