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Zm.23848 protein (Zea mays) - STRING interaction network
"Zm.23848" - Uncharacterized LOC103646084 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.23848Uncharacterized LOC103646084 (891 aa)    
Predicted Functional Partners:
GRMZM2G312944_P01
Hypothetical protein LOC100383580 (384 aa)
           
  0.410
GRMZM2G109885_P01
Hypothetical protein LOC100382564 (604 aa)
           
  0.410
GRMZM2G098214_P01
Hypothetical protein LOC100273802 (322 aa)
           
  0.410
GRMZM2G083745_P01
Ribosomal RNA methyltransferase 1 ; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (318 aa)
           
  0.410
Zm.132838
Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1 (611 aa)
           
  0.410
AY110473
Hypothetical protein LOC100279500 (1064 aa)
           
  0.410
Zm.89223
LOC100280086 (pco126282b), mRNA (201 aa)
           
  0.410
Zm.95838
Hypothetical protein LOC100274674 (LOC100274674), mRNA (309 aa)
           
  0.410
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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