STRINGSTRING
umc1109 protein (Zea mays) - STRING interaction network
"umc1109" - Hypothetical protein LOC100273843 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
umc1109Hypothetical protein LOC100273843 (249 aa)    
Predicted Functional Partners:
Zm.67016
Putative uncharacterized protein (1236 aa)
     
  0.972
GRMZM2G467943_P01
Uncharacterized protein (1012 aa)
     
  0.972
GRMZM2G025016_P01
Annotation not available (413 aa)
     
  0.972
GRMZM2G466519_P01
Putative DEAD-box ATP-dependent RNA helicase family protein (209 aa)
   
  0.969
GRMZM2G390729_P01
Uncharacterized protein (446 aa)
   
  0.949
GRMZM5G890815_P01
Uncharacterized LOC103634435 (942 aa)
     
 
  0.939
GRMZM2G385182_P01
Uncharacterized protein (1447 aa)
     
 
  0.939
GRMZM2G359105_P01
Uncharacterized LOC103647943 (918 aa)
     
 
  0.939
Zm.139520
Uncharacterized protein (260 aa)
     
 
  0.939
GRMZM2G132340_P02
Hypothetical protein LOC100383501 (607 aa)
     
 
  0.939
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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