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STRINGSTRING
GRMZM2G392683_P01 protein (Zea mays) - STRING interaction network
"GRMZM2G392683_P01" - annotation not available in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRMZM2G392683_P01annotation not available (339 aa)    
Predicted Functional Partners:
103630545
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1622 aa)
     
 
  0.965
rps19
30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
   
 
  0.951
IDP825
DNA-directed RNA polymerases II IV and V subunit 3; DNA-directed RNA polymerase II 36 kDa polypeptide A; Uncharacterized protein (328 aa)
   
 
  0.950
100284208
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex (129 aa)
     
 
  0.922
IDP1468
DNA-directed RNA polymerases II IV and V subunit 6A (142 aa)
 
 
  0.917
100282532
DNA-directed RNA polymerases I, II, and III 14.4 kDa polypeptide (142 aa)
 
 
  0.917
GRMZM5G834335_P02
DNA-directed RNA polymerases II IV and V subunit 10; DNA-directed RNA polymerase II 8.2 kDa polypeptide; DNA-directed RNA polymerase II polypeptide; Uncharacterized protein (84 aa)
 
 
  0.913
100279374
Mediator of RNA polymerase II transcription subunit 14 (1724 aa)
     
 
  0.894
GRMZM2G055807_P02
annotation not available (767 aa)
     
 
  0.894
MED6.1
RNA polymerase transcriptional regulation mediator subunit 6; RNA polymerase transcriptional regulation mediator subunit 6 isoform 1; RNA polymerase transcriptional regulation mediator subunit 6 isoform 2; Uncharacterized protein (249 aa)
       
 
  0.889
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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