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Zm.15207 protein (Zea mays) - STRING interaction network
"Zm.15207" - CUC2 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zm.15207CUC2 (358 aa)    
Predicted Functional Partners:
NAC67
NAC transcription factor NAM-1 (259 aa)
       
 
0.599
ids1
Indeterminate spikelet1 (433 aa)
           
  0.545
Zm.7856
Hypothetical protein LOC100384826 (LOC100384826), mRNA (470 aa)
           
  0.545
Zm.99687
Hypothetical protein LOC100384775 (LOC100384775), mRNA (447 aa)
           
  0.545
gras32
Hypothetical protein LOC100272800 (507 aa)
           
  0.545
KNOX4
Homeobox protein knotted-1-like 4 Fragment ; Probably binds to the DNA sequence 5’-TGAC-3’ (360 aa)
           
  0.528
GRMZM5G838285_P01
9-cis-epoxycarotenoid dioxygenase 1, chloroplastic-like (601 aa)
           
  0.527
YAB8
Putative uncharacterized protein (223 aa)
           
  0.527
Zm.11824
Yabby9 protein (337 aa)
           
  0.527
KN-1
Homeotic protein knotted-1 ; Possible transcription factor that regulates genes involved in development. Mutations in KN-1 alter leaf development. Foci of cells along the lateral vein do not differentiate properly but continue to divide, forming knots. May participate in the switch from indeterminate to determinate cell fates. Probably binds to the DNA sequence 5’-TGAC-3’ (359 aa)
           
  0.526
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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