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STRINGSTRING
tdsgR68B01 protein (Zea mays) - STRING interaction network
"tdsgR68B01" - Zinc finger CCCH domain-containing protein 19 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tdsgR68B01Zinc finger CCCH domain-containing protein 19 (2233 aa)    
Predicted Functional Partners:
mybr110
annotation not available (677 aa)
   
 
  0.944
GRMZM2G404011_P01
Protein disulfide-isomerase like 2-1; Putative thioredoxin superfamily protein (327 aa)
     
 
  0.912
IDP701
Eukaryotic translation initiation factor NCBP; Belongs to the eukaryotic initiation factor 4E family (229 aa)
       
 
  0.891
100191936
Chromatin structure-remodeling complex protein BSH; SWI/SNF, matrix-associated, actin-dependent regulator of chromatin subfamily B member 1; Uncharacterized protein (255 aa)
     
 
  0.880
103630545
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII) (1622 aa)
   
 
  0.866
103654440
ENHANCER OF AG-4 protein 2 (1392 aa)
     
 
  0.865
GRMZM2G156827_P01
annotation not available (660 aa)
     
 
  0.865
100384540
ENHANCER OF AG-4 protein 2 (1400 aa)
     
 
  0.865
103639119
Protein HUA2-LIKE 3 (1560 aa)
     
 
  0.865
umc1614
Chromatin structure-remodeling complex protein SYD (2594 aa)
     
 
  0.864
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays, Zea mays L., Zea mays var. japonica, maize
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